Yesterday I was trying to use a Python virtualenv for a python script and all the subprocesses generated by this script. You may ask, where is the problem? All subprocesses are started with the same environment variables as its mother/father...

Get the Data aka Reads

Given you know the SRA accession, best is you go to the SRA Run Browser. Enter the accession and get the link(s) to the corresponding data, usually in SRA format. Another possibility is to...